Contamination at CDC lab delayed rollout of coronavirus tests

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Contamination at CDC lab delayed rollout of coronavirus tests

The failure by the Centers for Disease Control and Prevention to quickly produce a test kit for detecting the novel coronavirus was triggered by a glaring scientific breakdown at the CDC’s central laboratory complex in Atlanta, according to scientists with knowledge of the matter and a determination by federal regulators.

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The CDC facilities that assembled the kits violated sound manufacturing practices, resulting in contamination of one of the three test components used in the highly sensitive detection process, the scientists said.

The cross contamination most likely occurred because chemical mixtures were assembled into the kits within a lab space that was also handling synthetic coronavirus material. The scientists also said the proximity deviated from accepted procedures and jeopardized testing for the virus.

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The Washington Post separately confirmed that Food and Drug Administration officials concluded that the CDC violated its own laboratory standards in making the kits. The substandard practices exposed the kits to contamination.

The troubled segment of the test was not critical to detecting the novel coronavirus, experts said. But after the difficulty emerged, CDC officials took more than a month to remove the unnecessary step from the kits, exacerbating nationwide delays in testing, according to an examination of federal documents and interviews with more than 30 present and former federal scientists and others familiar with the events. Many of them spoke on the condition of anonymity because they were not authorized to comment publicly.

This account confirms for the first time the contamination’s role in undermining the test and the CDC’s failure to meets its lab standards.



a group of people sitting at a desk in an office: People work at the Centers for Disease Control and Prevention in Atlanta last month.


© Jim Watson/AFP/Getty Images
People work at the Centers for Disease Control and Prevention in Atlanta last month.

The development and rollout of the original kits are subjects of an investigation led by the Department of Health and Human Services, federal officials said.

The CDC — America’s premier institution for combating the spread of catastrophic disease — declined to make available for interviews those involved in the test design or manufacturing. A spokesman, Benjamin N. Haynes, provided a statement Friday that acknowledged substandard “quality control” in its manufacturing of the test kits.

Those efforts “were not sufficient in this circumstance,” the statement said. The agency also said it has “implemented enhanced quality control to address the issue.”

The CDC said the problems with the test kits might have resulted from “a design and/or manufacturing issue or possible contamination.”

Haynes also defended the CDC’s work, saying that earlier troubles were eventually ironed out.

“As of March 23, more than 90 state and local public health labs in 50 states, the District of Columbia, Guam, and Puerto Rico verified they are successfully using [the] diagnostic kits,” Haynes said in the statement.

Shortcomings with the tests were first noticed in late January, after the CDC sent an initial batch to 26 public health labs across the country. According to those with knowledge of what unfolded, false-positive reactions emerged at 24 of the 26 labs that first tried out the kits in advance of analyzing samples gathered from patients.

“Only two of them got it right,’’ said a senior federal scientist who reviewed the development of the kits and internal test documentation, and who concluded that the false positives were caused by contamination that occurred at the CDC.

  • Slide 1 of 50: Signs of support are posted at Perry-Lecompton High School during the coronavirus pandemic in Perry, Kan., Sunday, April 19, 2020. (AP Photo/Orlin Wagner)

  • Slide 2 of 50: Jane Hassebroek jumps on the couch with her brother, Felix, while celebrating his birthday during the outbreak of the coronavirus disease (COVID-19) at their home in Brooklyn, New York, U.S., April 18, 2020. REUTERS/Caitlin Ochs     TPX IMAGES OF THE DAY

  • Slide 3 of 50: Protesters against the state's extended stay-at-home order to help slow the spread of coronavirus disease (COVID-19) demonstrate at the Capitol building in Austin, Texas, U.S. April 18, 2020. REUTERS/Nuri Vallbona

  • Slide 4 of 50: A notebook with U.S. President Donald Trump's notes rests on the briefing room podium following the daily coronavirus task force briefing at the White House in Washington, U.S., April 18, 2020. REUTERS/Al Drago

  • Slide 5 of 50: Hospital beds are pictured inside the Pasadena Convention Center which has been designated as an alternate care facility to treat COVID-19 patients during the global outbreak of the coronavirus disease (COVID-19), in Pasadena, California, U.S., April 18, 2020. REUTERS/Mario Anzuoni

  • Slide 6 of 50: People gather during the Utah Business Revival rally, calling for Utah's economy to be re-opened, Saturday, April 18, 2020, in Salt Lake City. Utah will aim to reopen restaurants and gyms and resume elective surgeries in early May under a plan unveiled Friday by Gov. Gary Herbert to gradually reopen the economy that has been decimated by the coronavirus pandemic. (AP Photo/Rick Bowmer)

  • Slide 7 of 50: An employee prepares a take away order at a fast food restaurant as the spread of coronavirus disease (COVID-19) affected local business in Roanoke, Virginia U.S., April 18, 2020. REUTERS/Carlos Barria

  • Slide 8 of 50: Passengers practice social distancing during the coronavirus outbreak as they wait to exit the Staten Island Ferry, Saturday, April 18, 2020, in New York. (AP Photo/Frank Franklin II)

  • Slide 9 of 50: NEW YORK,  NEW YORK - APRIL 19: A view of 42nd street and 8th Ave, the area which is usually filled with people at all times now empty amid the coronaviirus (COVID-19) pandemic of the day  on April 19, 2020 in New York City, United States. COVID-19 has spread to most countries around the world, claiming almost 160,000 lives and infecting over 2.3 million people. (Photo by Roy Rochlin/Getty Images)

  • Slide 10 of 50: COLORADO SPRINGS, CO - APRIL 18: Air Force Academy cadets salute during the national anthem as the class of 2020 graduates six weeks early due to the coronavirus pandemic on April 18, 2020 in Colorado Springs, Colorado. Saturday's graduation marks the first time a military academy is graduating a class early since WWII. (Photo by Michael Ciaglo/Getty Images)

  • Slide 11 of 50: Partitions are installed between beds as work is performed to turn Sleep Train Arena into a 400-bed emergency field hospital to help deal with the coronavirus outbreak in Sacramento, Calif., Saturday, April 18, 2020. The arena, the former home of the NBA's Sacramento Kings basketball team, is expected to begin receiving patients Monday, April 20. (AP Photo/Rich Pedroncelli,)

  • Slide 12 of 50: ARLINGTON, VIRGINIA - APRIL 18:  Newly married Tyler and Caryn Suiters embrace following their marriage ceremony performed by Rev. Andrew Merrow in an otherwise empty St. Mary’s Episcopal Church April 18, 2020 in Arlington, Virginia. Rev. Merrow and his wife Cameron Merrow were the only other attendees at the ceremony due to social distancing guidelines implemented in the wake of the COVID-19 pandemic. (Photo by Win McNamee/Getty Images)

  • Slide 13 of 50: Hundreds of New Hampshire residents rally at the State House, calling on the government to re-open the state for business as the coronavirus shutdown continues, in Concord, New Hampshire, on April 18, 2020. (Photo by Joseph Prezioso / AFP) (Photo by JOSEPH PREZIOSO/AFP via Getty Images)

  • Slide 14 of 50: Cars wait in a line to receive boxes of food at a drive-thru food distribution site from the Los Angeles Regional Food Bank and Los Angeles County Federation of Labor as authorities encourage social distancing to prevent the spread of coronavirus disease (COVID-19) outside the Teamsters Local 572 office in Carson, California, U.S., April 18, 2020. REUTERS/Patrick T. Fallon

  • Slide 15 of 50: Protesters rally at the Texas State Capitol to speak out against Texas' handling of the COVID-19 outbreak, in Austin, Texas, Saturday, April 18, 2020. Austin and many other Texas cities remain under stay-at-home orders due to the coronavirus outbreak except for essential personnel. (AP Photo/Eric Gay)

  • Slide 16 of 50: SPRINGFIELD, TN - APRIL 18:  General view of a drive thru coronavirus (covid-19) testing site on April 18, 2020 in Springfield, Tennessee. Tennessee drive thru testing sites now allow those without symptoms of coronavirus (covid-19) to receive testing. (Photo by Brett Carlsen/Getty Images)

  • Slide 17 of 50: ANNAPOLIS, MD - APRIL 18:  Protesters with the group Reopen Maryland rally near the State House to call on the state to life the stay-at-home order and reopen the economy on April 18, 2020 in Annapolis, Maryland. Most protestors rallied from inside their cars as they caused gridlock in a traffic circle and a smaller group protested outside of their cars. (Photo by Drew Angerer/Getty Images)

  • Slide 18 of 50: LOS ANGELES, CA - APRIL 18: An aerial view shows Los Angeles City Hall illuminated in blue as a tribute to healthcare workers responding to the coronavirus pandemic on April 18, 2020 in Los Angeles, California. As a result of the COVID-19 outbreak, only 45 percent of Los Angeles County residents still hold a job, according to findings from a national survey released yesterday. (Photo by David McNew/Getty Images)

  • Slide 19 of 50: Journalists wearing masks sit in chairs spaced for social distancing as Louisiana Gov. John Bel Edwards speaks at a production site on the Louisiana State University campus, where the school is manufacturing personal protection equipment for hospitals, in response to the coronavirus pandemic, in Baton Rouge, La., Friday, April 17, 2020. (AP Photo/Gerald Herbert)

  • Slide 20 of 50: A man and a child cross a street amid the coronavirus disease (COVID-19) outbreak in Chelsea, Massachusetts, U.S., April 17, 2020.   REUTERS/Brian Snyder

  • Slide 21 of 50: Medical workers pose for photos taken by coworkers as they stand with signs saying

  • Slide 22 of 50: Uber motorized scooters and bicycles are stored in a vacant parking lot at the U.S. Salvation Army building, as the coronavirus disease (COVID-19) outbreak continues, in Washington, U.S., April 17, 2020. REUTERS/Tom Brenner

  • Slide 23 of 50: Adm. Brett Giroir, assistant secretary of Health and Human Services, speaks about the coronavirus in the James Brady Press Briefing Room of the White House, Friday, April 17, 2020, in Washington. (AP Photo/Alex Brandon)

  • Slide 24 of 50: A

  • Slide 25 of 50: Banners are seen in a green beans field open for people to harvest for free, as the spread of the coronavirus disease (COVID-19) continues, in Homestead, Florida, U.S., April 17, 2020. REUTERS/Marco Bello

  • Slide 26 of 50: WASHINGTON, DC - APRIL 17: In a protest designed to adhere to social-distancing and with care taken for safety, 1,000 pop-up signs were arranged on the lawn of the U.S. Capitol Building showing the faces of nurses and frontline healthcare workers pleading for adequate personal protective equipment (PPE) on April 17, 2020 in Washington, DC. The signs, representing 18,000 American health care workers each, including selfies taken by doctors, nurses and other medical professionals actively fighting to save the lives of coronavirus patients across the United States. The demonstration was organized by a collection of progressive advocacy organizations, health care organizations, and unions representing healthcare workers including the American Federation of Teachers, Communications Workers of America, FrontlinePPENow, GetUsPPE, MoveOn, National Nurses United, Service Employees International Union, and Women’s March. The organizations have jointly collected more than 2 million actions calling for urgent production and distribution of PPE. (Photo by

  • Slide 27 of 50: Volunteers help the San Antonio Food Bank distribute food to more that 2,000 at the Alamodome in San Antonio, Friday, April 17, 2020. San Antonio remains under stay-at-home orders due to the COVID-19 outbreak. (

  • Slide 28 of 50: Protesters gather outside Minnesota Gov. Tim Walz' official residence Friday, April 17, 2020, in St. Paul, Minn., to call on him to loosen stay-at-home restrictions imposed across the state because of the coronavirus. The new coronavirus causes mild or moderate symptoms for most people, but for some, especially older adults and people with existing health problems, it can cause more severe illness or death. (

  • Slide 29 of 50: Readign, PA - April 17: From left are kitchen staff Hilda Vives and Juan Ortiz, preparing components of the bag lunches. At Centro Hispano Daniel Torres where kitchen workers were preparing bag lunches Friday morning April 17, 2020 to be distributed at Olivet Boys and Girls Club locations to help feed children in Reading during the coronavirus / COVID-19 crisis. They have prepared 500 lunches for Saturday, and 500 for Sunday. (Photo by

  • Slide 30 of 50: ALBANY, NY - APRIL 17: New York Governor Andrew Cuomo gives his a press briefing about the coronavirus crisis on April 17, 2020 in Albany, New York.Cuomo along with governors from other East Coast states are extending their shutdown of nonessential businesses to May 15. “We have to continue doing what we’re doing. I’d like to see that infection rate get down even more...

  • Slide 31 of 50: Florida Gov. Ron DeSantis talks to the media during a press conference at the Urban League of Broward County to announce that Florida's first two walk-through coronavirus testing sites will be opening in Broward County as the Novel Coronavirus pandemic continues on Friday, April 17, 2020 in Fort Lauderdale, Fla. The sites will open for testing on Saturday and will start with 200 tests per day, Gov. DeSantis said. (

  • Slide 32 of 50: A COVID-19 IgG and IgM Rapid Test Cassette is displayed on April 16, in New York City. The take home test says they can tell a person if they have Coronavirus antibodies in their system, thus indicating that they have had the virus.

  • Slide 33 of 50: A woman wearing a face mask and a plastic bag pulls a cart loaded with bags of recyclables through the streets of Lower Manhattan during the outbreak of the novel coronavirus (which causes COVID-19) on April 16, in New York City.

  • Slide 34 of 50: A New York City Fire Department (FDNY) Emergency Medical Technician (EMT) wearing personal protective equipment assist a woman who was having difficulty breathing during ongoing outbreak of the coronavirus disease (COVID19) in New York, April 15.

  • Slide 35 of 50: An animal keeper feeds a piece of fruit to a fruit bat during a behind the scenes interactive live stream from the Oakland Zoo on April 16, in Oakland, California. Since the Oakland Zoo has been closed to the public during the shelter in place, they are offering a subscription based service that will feature five weekly behind the scenes live streamed interactive programs that will feature animal keepers and their animals. Viewers are able to interact with the keepers by submitting questions to about the animals.

  • Slide 36 of 50: Demonstrators measure out a 'social distance' of six feet as they gather in opposition to Virginia's stay-at-home order and business closures in the wake of the coronavirus disease (COVID-19) outbreak during a protest against the lockdown measures in Richmond, Virginia, April 16.

  • Slide 37 of 50: Michele Pottberg, a Senior Nurse Clinician on the COVID-19 treatment ward at NYU Langone Medical Center pats a New York Police Department (NYPD) horse outside the hospital on 1st Avenue in Manhattan as NYPD Mounted Police and other units came to cheer and thank healthcare workers at 7pm during the outbreak of the coronavirus disease (COVID-19) in New York City, New York,  April 16.

  • Slide 38 of 50: WASHINGTON, DC - APRIL 16: U.S. President Donald Trump speaks as Secretary of Transportation Elaine Chao listens during an event “celebrating America’s Truckers” at the South Lawn of the White House April 16, 2020 in Washington, DC. President Trump honored American truckers for their efforts to move food and supplies around the country during the COVID-19 pandemic.  (Photo by

  • Slide 39 of 50: NORTH BABYLON, NEW YORK - APRIL 16: Workers from Island Harvest and North Babylon High School prepare to serve goods to patrons on April 16, 2020 at North Babylon High School in North Babylon, New York. Since founded in 1992, Island Harvest has become Long Island’s largest hunger-relief organization and is a leader in providing food to those in need during the COVID-19 pandemic. North Babylon High School has been serving 850 people a day as they arrange fresh prepared lunches for kids and food supplements for nearby residents. (Photo by

  • Slide 40 of 50: LOS ANGELES, CALIFORNIA - APRIL 16: Sun Pacific founder and CEO Berne Evans delivers Cuties to Cedars-Sinai Medical Center on April 16, 2020 in Los Angeles, California. Cuties has donated 100,000 bags of their mandarins to healthcare workers at 28 hospitals throughout Southern California during the COVID-19 pandemic. (Photo by

  • Slide 41 of 50: The National Guard delivers food to some Massachusetts communities hardest hit by the coronavirus pandemic in Chelsea, Massachusetts on April 16, 2020. - MEMA and the National Guard brought hundreds of boxes of food to Chelsea, which has the highest concentration of COVID-19 cases in the state. (Photo by Joseph Prezioso / AFP) (Photo by

  • Slide 42 of 50: Protesters rally against stay-at-home orders related to the coronavirus pandemic at Capitol Square in Richmond, Virginia on April 16, 2020. - With over two million cases worldwide, deaths approaching 140,000, and nearly 4.4 billion people subject to some degree of lockdown, COVID-19 has brought much of the global economy to a standstill. (Photo by Ryan M. Kelly / AFP) (Photo by

  • Slide 43 of 50: Supporters of the Michigan Conservative Coalition protest against the state's extended stay-at-home order, amid the spread of the coronavirus disease (COVID-19), at the Capitol building in Lansing, Michigan, U.S. April 15, 2020. REUTERS/Seth Herald     TPX IMAGES OF THE DAY

  • Slide 44 of 50: New Jersey police officers and health workers are seen in a newly approved saliva-based coronavirus disease (COVID-19) testing site during the outbreak of the coronavirus disease (COVID-19) in Edison, New Jersey, U.S., April 15, 2020. REUTERS/Eduardo Munoz

  • Slide 45 of 50: Dwayne Evans reads a book near his cot at a temporary men's shelter run by the Downtown Emergency Service Center (DESC) at the Seattle Center Exhibition Hall, currently with 75 beds spaced at least six feet apart, during the coronavirus disease (COVID-19) outbreak in Seattle, Washington, U.S. April 15, 2020. The location has had two positive cases of the disease, with both people moved into isolation and the rest testing negative.  REUTERS/Lindsey Wasson

  • Slide 46 of 50: A tag for cleaning crews hangs on the office doors of U.S. Senate Majority Leader Mitch McConnell (R-KY) in the mostly empty U.S. Capitol during the coronavirus disease (COVID-19) outbreak in Washington, U.S., April 15, 2020. REUTERS/Jonathan Ernst

  • Slide 47 of 50: NEW HYDE PARK, NEW YORK - APRIL 15: Dr. Cory Baker disinfects a fellow worker at a ProHEALTH Care coronavirus testing site on April 15, 2020 in New Hyde Park, New York. Long Island now has multiple sites for drive-thru COVID-19 testing. (Photo by

  • Slide 48 of 50: A man wearing a mask stands in front of a poster of  Coachella on La Brea Avenue during the COVID-19 crisis, April 15, 2020, in Hollywood, California. - COVID-19 has killed at least 131,319 people around the world, with Europe accounting for more than two-thirds of the deaths, according to an AFP tally Wednesday from official sources. Europe has reported 88,716 deaths, while the United States has the single highest toll at 26,950.The US is followed by Italy with 21,645 deaths, Spain with 18,579 and France with 17,167. (Photo by VALERIE MACON / AFP) (Photo by

  • Slide 49 of 50: A sign reading 'Keep This Far Apart', to remind people of social distancing, is seen in a park on April 15, 2020 in New York City. - Data on statewide manufacturing from the Federal Reserve Bank of New York, home to the worst coronavirus outbreak in the country, showed business activity plummeting more than ever. The Empire State Manufacturing Survey fell by 57 points to -78.2, its lowest level ever recorded. The index hit -34.3 during the global financial crisis. (Photo by Angela Weiss / AFP) (Photo by

  • Slide 50 of 50: MIAMI, FLORIDA - APRIL 15: Asuncion Esquivel uses a sewing machine to put together an isolation gown at the Goodwill South Florida facility for doctors working in hospitals on April 15, 2020 in Miami, Florida. This week, Goodwill has started utilizing a portion of its recently shuttered sewing operations, and rehired some of its staff, to manufacture Personal Protection Equipment (PPE) for medical personnel at hospitals that are part of Baptist Health. In a press release David Landsberg, CEO of Goodwill South Florida said, “We are happy that we are able to leverage our available work force, facilities and machines to do our part in helping those at the front lines of this fight against COVID-19

Signs of support are posted at Perry-Lecompton High School in Perry, Kansas, on April 19.

Jane Hassebroek jumps on the couch with her brother, Felix, while celebrating his birthday at their home in Brooklyn, on April 18.

Protesters against the state’s extended stay-at-home order, demonstrate at the Capitol building in Austin, Texas, on April 18.

A notebook with U.S. President Donald Trump’s notes rests on the briefing room podium following the daily coronavirus task force briefing at the White House in Washington, on April 18.

Hospital beds are pictured inside the Pasadena Convention Center, which has been designated as an alternate care facility to treat COVID-19 patients, in Pasadena, California, on April 18.

People call for Utah’s economy to be re-opened, on April 18, in Salt Lake City, Utah

An employee prepares a take away order at a fast food restaurant as the spread of COVID-19 affected local business on April 18 in Roanoke, Virginia.

Passengers practice social distancing during the coronavirus outbreak as they wait to exit the Staten Island Ferry on April 18 in New York. 

A view of 42nd street and 8th Ave on April 19 in New York City.

Air Force Academy cadets salute during the national anthem as the class of 2020 graduates six weeks early due to the coronavirus pandemic on April 18 in Colorado Springs, Colorado. Saturday’s graduation marks the first time a military academy is graduating a class early since WWII.

Partitions are installed between beds as work is performed to turn Sleep Train Arena into a 400-bed emergency field hospital to help deal with the coronavirus outbreak in Sacramento, Calif. on April 18. The arena, the former home of the NBA’s Sacramento Kings basketball team, is expected to begin receiving patients Monday, April 20.

Newly married Tyler and Caryn Suiters embrace following their marriage ceremony performed by Rev. Andrew Merrow in an otherwise empty St. Mary’s Episcopal Church, on April 18, in Arlington, Virginia. Rev. Merrow and his wife Cameron Merrow were the only other attendees at the ceremony due to social distancing guidelines.

Hundreds of New Hampshire residents rally at the State House, calling on the government to re-open the state for business as the coronavirus shutdown continues, in Concord, New Hampshire, on April 18.

Cars wait in a line to receive boxes of food at a drive-thru food distribution site from the Los Angeles Regional Food Bank and Los Angeles County Federation of Labor as authorities encourage social distancing outside the Teamsters Local 572 office, in Carson, California, on April 18.

Protesters rally at the Texas State Capitol to speak out against Texas’ handling of the pandemic, in Austin, Texas, on April 18. Austin and many other Texas cities remain under stay-at-home orders except for essential personnel.

General view of a drive thru coronavirus (covid-19) testing site on April 18, in Springfield, Tennessee. Tennessee drive-thru testing sites now allow those without symptoms of coronavirus to receive testing.

Protesters with the group “Reopen Maryland” rally near the State House to call on the state to lift the stay-at-home orders and reopen the economy, on April 18, in Annapolis, Maryland. Most protesters rallied from inside their cars as they caused gridlock in a traffic circle and a smaller group protested outside of their cars.

An aerial view shows Los Angeles City Hall illuminated in blue as a tribute to healthcare workers responding to the pandemic, on April 18, in Los Angeles, California.

Journalists wearing masks sit in chairs spaced for social distancing as Louisiana Gov. John Bel Edwards speaks on April 17, in Baton Rouge, La.

A man and a child cross a street amid the coronavirus (COVID-19) outbreak on April 17, in Chelsea, Massachusetts.

Medical workers pose for photos taken by coworkers as they stand with signs s